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        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2022-02-25, 12:40 based on data in: /weka/data/lab/kelley/projects/pmex/capture/nick_quality


        General Statistics

        Showing 400/400 rows and 3/5 columns.
        Sample Name% Dups% GCM Seqs
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA01_i5-513_i7-97_S554_L004_R1_001
        26.7%
        45%
        1.2
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA01_i5-513_i7-97_S554_L004_R2_001
        24.8%
        45%
        1.2
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA02_i5-513_i7-98_S555_L004_R1_001
        19.3%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA02_i5-513_i7-98_S555_L004_R2_001
        17.6%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA03_i5-513_i7-99_S556_L004_R1_001
        21.0%
        44%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA03_i5-513_i7-99_S556_L004_R2_001
        18.6%
        44%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA04_i5-513_i7-100_S557_L004_R1_001
        20.3%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA04_i5-513_i7-100_S557_L004_R2_001
        18.3%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA05_i5-513_i7-101_S558_L004_R1_001
        14.2%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA05_i5-513_i7-101_S558_L004_R2_001
        12.3%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA06_i5-513_i7-102_S559_L004_R1_001
        17.3%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA06_i5-513_i7-102_S559_L004_R2_001
        15.3%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA07_i5-513_i7-103_S560_L004_R1_001
        20.6%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA07_i5-513_i7-103_S560_L004_R2_001
        18.7%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA08_i5-513_i7-104_S561_L004_R1_001
        16.5%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA08_i5-513_i7-104_S561_L004_R2_001
        14.5%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA09_i5-513_i7-105_S562_L004_R1_001
        17.0%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA09_i5-513_i7-105_S562_L004_R2_001
        15.0%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA10_i5-513_i7-106_S563_L004_R1_001
        21.6%
        45%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA10_i5-513_i7-106_S563_L004_R2_001
        19.7%
        45%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA11_i5-513_i7-107_S564_L004_R1_001
        18.5%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA11_i5-513_i7-107_S564_L004_R2_001
        16.7%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA12_i5-513_i7-108_S565_L004_R1_001
        21.8%
        45%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WA12_i5-513_i7-108_S565_L004_R2_001
        20.1%
        45%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB01_i5-513_i7-109_S566_L004_R1_001
        23.3%
        45%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB01_i5-513_i7-109_S566_L004_R2_001
        21.4%
        45%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB02_i5-513_i7-110_S567_L004_R1_001
        16.7%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB02_i5-513_i7-110_S567_L004_R2_001
        14.8%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB03_i5-513_i7-111_S568_L004_R1_001
        17.0%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB03_i5-513_i7-111_S568_L004_R2_001
        15.2%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB04_i5-513_i7-112_S569_L004_R1_001
        16.0%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB04_i5-513_i7-112_S569_L004_R2_001
        13.7%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB05_i5-513_i7-113_S570_L004_R1_001
        19.2%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB05_i5-513_i7-113_S570_L004_R2_001
        17.2%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB06_i5-513_i7-114_S571_L004_R1_001
        17.1%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB06_i5-513_i7-114_S571_L004_R2_001
        14.7%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB07_i5-513_i7-115_S572_L004_R1_001
        20.2%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB07_i5-513_i7-115_S572_L004_R2_001
        17.9%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB08_i5-513_i7-116_S573_L004_R1_001
        20.9%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB08_i5-513_i7-116_S573_L004_R2_001
        18.4%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB09_i5-513_i7-117_S574_L004_R1_001
        17.9%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB09_i5-513_i7-117_S574_L004_R2_001
        15.7%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB10_i5-513_i7-118_S575_L004_R1_001
        25.6%
        47%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB10_i5-513_i7-118_S575_L004_R2_001
        23.9%
        47%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB11_i5-513_i7-119_S576_L004_R1_001
        25.2%
        46%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB11_i5-513_i7-119_S576_L004_R2_001
        23.5%
        47%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB12_i5-513_i7-120_S577_L004_R1_001
        20.8%
        44%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WB12_i5-513_i7-120_S577_L004_R2_001
        18.7%
        44%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC01_i5-513_i7-121_S578_L004_R1_001
        20.2%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC01_i5-513_i7-121_S578_L004_R2_001
        17.9%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC02_i5-513_i7-122_S579_L004_R1_001
        20.9%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC02_i5-513_i7-122_S579_L004_R2_001
        19.0%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC03_i5-513_i7-123_S580_L004_R1_001
        25.9%
        46%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC03_i5-513_i7-123_S580_L004_R2_001
        23.9%
        46%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC04_i5-513_i7-124_S581_L004_R1_001
        17.8%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC04_i5-513_i7-124_S581_L004_R2_001
        15.5%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC05_i5-513_i7-125_S582_L004_R1_001
        16.3%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC05_i5-513_i7-125_S582_L004_R2_001
        14.0%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC06_i5-513_i7-126_S583_L004_R1_001
        19.3%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC06_i5-513_i7-126_S583_L004_R2_001
        16.9%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC07_i5-513_i7-127_S584_L004_R1_001
        20.6%
        44%
        1.3
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC07_i5-513_i7-127_S584_L004_R2_001
        18.6%
        44%
        1.3
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC08_i5-513_i7-128_S585_L004_R1_001
        22.5%
        44%
        1.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC08_i5-513_i7-128_S585_L004_R2_001
        20.4%
        44%
        1.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC09_i5-513_i7-129_S586_L004_R1_001
        19.0%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC09_i5-513_i7-129_S586_L004_R2_001
        16.7%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC10_i5-513_i7-130_S587_L004_R1_001
        17.3%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC10_i5-513_i7-130_S587_L004_R2_001
        15.6%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC11_i5-513_i7-131_S588_L004_R1_001
        21.3%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC11_i5-513_i7-131_S588_L004_R2_001
        19.5%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC12_i5-513_i7-132_S589_L004_R1_001
        20.7%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WC12_i5-513_i7-132_S589_L004_R2_001
        18.9%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD01_i5-513_i7-133_S590_L004_R1_001
        25.2%
        44%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD01_i5-513_i7-133_S590_L004_R2_001
        23.3%
        44%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD02_i5-513_i7-134_S591_L004_R1_001
        22.4%
        44%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD02_i5-513_i7-134_S591_L004_R2_001
        20.0%
        44%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD03_i5-513_i7-135_S592_L004_R1_001
        19.2%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD03_i5-513_i7-135_S592_L004_R2_001
        17.0%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD04_i5-513_i7-136_S593_L004_R1_001
        15.0%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD04_i5-513_i7-136_S593_L004_R2_001
        12.9%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD05_i5-513_i7-137_S594_L004_R1_001
        13.9%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD05_i5-513_i7-137_S594_L004_R2_001
        11.8%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD06_i5-513_i7-138_S595_L004_R1_001
        14.7%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD06_i5-513_i7-138_S595_L004_R2_001
        12.4%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD07_i5-513_i7-139_S596_L004_R1_001
        17.1%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD07_i5-513_i7-139_S596_L004_R2_001
        14.6%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD08_i5-513_i7-140_S597_L004_R1_001
        21.1%
        43%
        1.4
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD08_i5-513_i7-140_S597_L004_R2_001
        18.8%
        43%
        1.4
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD09_i5-513_i7-141_S598_L004_R1_001
        20.8%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD09_i5-513_i7-141_S598_L004_R2_001
        18.7%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD10_i5-513_i7-142_S599_L004_R1_001
        17.8%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD10_i5-513_i7-142_S599_L004_R2_001
        16.0%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD11_i5-513_i7-143_S600_L004_R1_001
        20.6%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD11_i5-513_i7-143_S600_L004_R2_001
        18.7%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD12_i5-513_i7-144_S601_L004_R1_001
        20.3%
        44%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WD12_i5-513_i7-144_S601_L004_R2_001
        18.0%
        44%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE01_i5-513_i7-145_S602_L004_R1_001
        22.1%
        44%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE01_i5-513_i7-145_S602_L004_R2_001
        19.9%
        44%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE02_i5-513_i7-146_S603_L004_R1_001
        20.1%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE02_i5-513_i7-146_S603_L004_R2_001
        17.8%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE03_i5-513_i7-147_S604_L004_R1_001
        16.9%
        43%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE03_i5-513_i7-147_S604_L004_R2_001
        14.5%
        43%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE04_i5-513_i7-148_S605_L004_R1_001
        19.1%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE04_i5-513_i7-148_S605_L004_R2_001
        17.1%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE05_i5-513_i7-149_S606_L004_R1_001
        16.0%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE05_i5-513_i7-149_S606_L004_R2_001
        13.7%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE06_i5-513_i7-150_S607_L004_R1_001
        14.7%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE06_i5-513_i7-150_S607_L004_R2_001
        12.3%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE07_i5-513_i7-151_S608_L004_R1_001
        22.3%
        44%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE07_i5-513_i7-151_S608_L004_R2_001
        19.8%
        44%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE08_i5-513_i7-152_S609_L004_R1_001
        16.2%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE08_i5-513_i7-152_S609_L004_R2_001
        13.9%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE09_i5-513_i7-153_S610_L004_R1_001
        21.2%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE09_i5-513_i7-153_S610_L004_R2_001
        19.5%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE10_i5-513_i7-154_S611_L004_R1_001
        24.9%
        45%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE10_i5-513_i7-154_S611_L004_R2_001
        23.0%
        45%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE11_i5-513_i7-155_S612_L004_R1_001
        18.0%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE11_i5-513_i7-155_S612_L004_R2_001
        16.4%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE12_i5-513_i7-156_S613_L004_R1_001
        15.6%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WE12_i5-513_i7-156_S613_L004_R2_001
        13.7%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF01_i5-513_i7-157_S614_L004_R1_001
        17.8%
        43%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF01_i5-513_i7-157_S614_L004_R2_001
        15.9%
        43%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF02_i5-513_i7-158_S615_L004_R1_001
        19.5%
        43%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF02_i5-513_i7-158_S615_L004_R2_001
        17.2%
        43%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF03_i5-513_i7-159_S616_L004_R1_001
        16.0%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF03_i5-513_i7-159_S616_L004_R2_001
        13.9%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF04_i5-513_i7-160_S617_L004_R1_001
        15.5%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF04_i5-513_i7-160_S617_L004_R2_001
        13.5%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF05_i5-513_i7-161_S618_L004_R1_001
        18.4%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF05_i5-513_i7-161_S618_L004_R2_001
        16.5%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF06_i5-513_i7-162_S619_L004_R1_001
        15.5%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF06_i5-513_i7-162_S619_L004_R2_001
        13.6%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF07_i5-513_i7-163_S620_L004_R1_001
        18.8%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF07_i5-513_i7-163_S620_L004_R2_001
        16.7%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF08_i5-513_i7-164_S621_L004_R1_001
        19.8%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF08_i5-513_i7-164_S621_L004_R2_001
        17.7%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF09_i5-513_i7-165_S622_L004_R1_001
        15.9%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF09_i5-513_i7-165_S622_L004_R2_001
        14.0%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF10_i5-513_i7-166_S623_L004_R1_001
        21.9%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF10_i5-513_i7-166_S623_L004_R2_001
        20.0%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF11_i5-513_i7-167_S624_L004_R1_001
        19.7%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF11_i5-513_i7-167_S624_L004_R2_001
        18.0%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF12_i5-513_i7-168_S625_L004_R1_001
        16.5%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WF12_i5-513_i7-168_S625_L004_R2_001
        14.5%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG01_i5-513_i7-169_S626_L004_R1_001
        21.0%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG01_i5-513_i7-169_S626_L004_R2_001
        19.4%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG02_i5-513_i7-170_S627_L004_R1_001
        18.0%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG02_i5-513_i7-170_S627_L004_R2_001
        16.1%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG03_i5-513_i7-171_S628_L004_R1_001
        14.8%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG03_i5-513_i7-171_S628_L004_R2_001
        13.4%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG04_i5-513_i7-172_S629_L004_R1_001
        16.1%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG04_i5-513_i7-172_S629_L004_R2_001
        14.2%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG05_i5-513_i7-173_S630_L004_R1_001
        16.9%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG05_i5-513_i7-173_S630_L004_R2_001
        15.2%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG06_i5-513_i7-174_S631_L004_R1_001
        18.4%
        45%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG06_i5-513_i7-174_S631_L004_R2_001
        16.7%
        45%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG07_i5-513_i7-175_S632_L004_R1_001
        20.4%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG07_i5-513_i7-175_S632_L004_R2_001
        18.5%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG08_i5-513_i7-176_S633_L004_R1_001
        13.2%
        43%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG08_i5-513_i7-176_S633_L004_R2_001
        11.9%
        43%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG09_i5-513_i7-177_S634_L004_R1_001
        16.9%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG09_i5-513_i7-177_S634_L004_R2_001
        14.9%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG10_i5-513_i7-178_S635_L004_R1_001
        20.8%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG10_i5-513_i7-178_S635_L004_R2_001
        18.6%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG11_i5-513_i7-179_S636_L004_R1_001
        16.4%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG11_i5-513_i7-179_S636_L004_R2_001
        14.1%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG12_i5-513_i7-180_S637_L004_R1_001
        20.0%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WG12_i5-513_i7-180_S637_L004_R2_001
        18.4%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH01_i5-513_i7-181_S638_L004_R1_001
        19.9%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH01_i5-513_i7-181_S638_L004_R2_001
        18.3%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH02_i5-513_i7-182_S639_L004_R1_001
        19.5%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH02_i5-513_i7-182_S639_L004_R2_001
        17.9%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH03_i5-513_i7-183_S640_L004_R1_001
        15.3%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH03_i5-513_i7-183_S640_L004_R2_001
        13.2%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH04_i5-513_i7-184_S641_L004_R1_001
        17.3%
        43%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH04_i5-513_i7-184_S641_L004_R2_001
        15.5%
        43%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH05_i5-513_i7-185_S642_L004_R1_001
        15.4%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH05_i5-513_i7-185_S642_L004_R2_001
        13.0%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH06_i5-513_i7-186_S643_L004_R1_001
        15.0%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH06_i5-513_i7-186_S643_L004_R2_001
        12.5%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH07_i5-513_i7-187_S644_L004_R1_001
        20.0%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH07_i5-513_i7-187_S644_L004_R2_001
        17.8%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH08_i5-513_i7-188_S645_L004_R1_001
        22.1%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH08_i5-513_i7-188_S645_L004_R2_001
        19.6%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH09_i5-513_i7-189_S646_L004_R1_001
        16.8%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH09_i5-513_i7-189_S646_L004_R2_001
        14.9%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH10_i5-513_i7-190_S647_L004_R1_001
        23.3%
        45%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH10_i5-513_i7-190_S647_L004_R2_001
        21.8%
        45%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH11_i5-513_i7-191_S648_L004_R1_001
        23.4%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH11_i5-513_i7-191_S648_L004_R2_001
        21.5%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH12_i5-513_i7-192_S649_L004_R1_001
        23.5%
        45%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P01_WH12_i5-513_i7-192_S649_L004_R2_001
        21.3%
        45%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA01_i5-512_i7-97_S650_L004_R1_001
        21.0%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA01_i5-512_i7-97_S650_L004_R2_001
        19.1%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA02_i5-512_i7-98_S651_L004_R1_001
        17.3%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA02_i5-512_i7-98_S651_L004_R2_001
        15.3%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA03_i5-512_i7-99_S652_L004_R1_001
        23.7%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA03_i5-512_i7-99_S652_L004_R2_001
        21.6%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA04_i5-512_i7-100_S653_L004_R1_001
        18.7%
        45%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA04_i5-512_i7-100_S653_L004_R2_001
        17.4%
        45%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA05_i5-512_i7-101_S654_L004_R1_001
        18.0%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA05_i5-512_i7-101_S654_L004_R2_001
        16.1%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA06_i5-512_i7-102_S655_L004_R1_001
        24.1%
        46%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA06_i5-512_i7-102_S655_L004_R2_001
        22.6%
        46%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA07_i5-512_i7-103_S656_L004_R1_001
        18.8%
        45%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA07_i5-512_i7-103_S656_L004_R2_001
        17.3%
        45%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA08_i5-512_i7-104_S657_L004_R1_001
        17.2%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA08_i5-512_i7-104_S657_L004_R2_001
        15.1%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA09_i5-512_i7-105_S658_L004_R1_001
        17.3%
        43%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA09_i5-512_i7-105_S658_L004_R2_001
        15.3%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA10_i5-512_i7-106_S659_L004_R1_001
        18.7%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA10_i5-512_i7-106_S659_L004_R2_001
        16.8%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA11_i5-512_i7-107_S660_L004_R1_001
        21.1%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA11_i5-512_i7-107_S660_L004_R2_001
        19.4%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA12_i5-512_i7-108_S661_L004_R1_001
        19.1%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WA12_i5-512_i7-108_S661_L004_R2_001
        17.4%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB01_i5-512_i7-109_S662_L004_R1_001
        18.2%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB01_i5-512_i7-109_S662_L004_R2_001
        16.5%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB02_i5-512_i7-110_S663_L004_R1_001
        15.4%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB02_i5-512_i7-110_S663_L004_R2_001
        13.5%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB03_i5-512_i7-111_S664_L004_R1_001
        19.1%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB03_i5-512_i7-111_S664_L004_R2_001
        17.5%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB04_i5-512_i7-112_S665_L004_R1_001
        13.8%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB04_i5-512_i7-112_S665_L004_R2_001
        11.6%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB05_i5-512_i7-113_S666_L004_R1_001
        21.4%
        45%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB05_i5-512_i7-113_S666_L004_R2_001
        19.5%
        45%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB06_i5-512_i7-114_S667_L004_R1_001
        22.2%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB06_i5-512_i7-114_S667_L004_R2_001
        20.3%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB07_i5-512_i7-115_S668_L004_R1_001
        17.8%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB07_i5-512_i7-115_S668_L004_R2_001
        15.7%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB08_i5-512_i7-116_S669_L004_R1_001
        27.2%
        44%
        1.9
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB08_i5-512_i7-116_S669_L004_R2_001
        24.7%
        44%
        1.9
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB09_i5-512_i7-117_S670_L004_R1_001
        22.3%
        45%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB09_i5-512_i7-117_S670_L004_R2_001
        20.3%
        45%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB10_i5-512_i7-118_S671_L004_R1_001
        25.9%
        45%
        1.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB10_i5-512_i7-118_S671_L004_R2_001
        23.8%
        45%
        1.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB11_i5-512_i7-119_S672_L004_R1_001
        25.8%
        45%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB11_i5-512_i7-119_S672_L004_R2_001
        23.9%
        45%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB12_i5-512_i7-120_S673_L004_R1_001
        20.5%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WB12_i5-512_i7-120_S673_L004_R2_001
        18.9%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC01_i5-512_i7-121_S674_L004_R1_001
        24.0%
        45%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC01_i5-512_i7-121_S674_L004_R2_001
        22.1%
        45%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC02_i5-512_i7-122_S675_L004_R1_001
        23.5%
        45%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC02_i5-512_i7-122_S675_L004_R2_001
        21.9%
        45%
        1.1
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC03_i5-512_i7-123_S676_L004_R1_001
        25.1%
        46%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC03_i5-512_i7-123_S676_L004_R2_001
        23.0%
        46%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC04_i5-512_i7-124_S677_L004_R1_001
        21.0%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC04_i5-512_i7-124_S677_L004_R2_001
        18.8%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC05_i5-512_i7-125_S678_L004_R1_001
        24.2%
        45%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC05_i5-512_i7-125_S678_L004_R2_001
        22.5%
        45%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC06_i5-512_i7-126_S679_L004_R1_001
        21.6%
        45%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC06_i5-512_i7-126_S679_L004_R2_001
        19.4%
        45%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC07_i5-512_i7-127_S680_L004_R1_001
        17.9%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC07_i5-512_i7-127_S680_L004_R2_001
        15.4%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC08_i5-512_i7-128_S681_L004_R1_001
        23.5%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC08_i5-512_i7-128_S681_L004_R2_001
        21.4%
        44%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC09_i5-512_i7-129_S682_L004_R1_001
        17.1%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC09_i5-512_i7-129_S682_L004_R2_001
        14.7%
        43%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC10_i5-512_i7-130_S683_L004_R1_001
        20.7%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC10_i5-512_i7-130_S683_L004_R2_001
        18.5%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC11_i5-512_i7-131_S684_L004_R1_001
        22.9%
        45%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC11_i5-512_i7-131_S684_L004_R2_001
        21.0%
        45%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC12_i5-512_i7-132_S685_L004_R1_001
        17.3%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WC12_i5-512_i7-132_S685_L004_R2_001
        15.2%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD01_i5-512_i7-133_S686_L004_R1_001
        24.1%
        45%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD01_i5-512_i7-133_S686_L004_R2_001
        22.2%
        45%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD02_i5-512_i7-134_S687_L004_R1_001
        26.2%
        44%
        1.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD02_i5-512_i7-134_S687_L004_R2_001
        24.5%
        44%
        1.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD03_i5-512_i7-135_S688_L004_R1_001
        19.7%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD03_i5-512_i7-135_S688_L004_R2_001
        17.8%
        44%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD04_i5-512_i7-136_S689_L004_R1_001
        20.3%
        43%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD04_i5-512_i7-136_S689_L004_R2_001
        17.6%
        43%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD05_i5-512_i7-137_S690_L004_R1_001
        22.6%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD05_i5-512_i7-137_S690_L004_R2_001
        20.0%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD06_i5-512_i7-138_S691_L004_R1_001
        25.7%
        45%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD06_i5-512_i7-138_S691_L004_R2_001
        23.4%
        45%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD07_i5-512_i7-139_S692_L004_R1_001
        20.7%
        43%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD07_i5-512_i7-139_S692_L004_R2_001
        17.8%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD08_i5-512_i7-140_S693_L004_R1_001
        24.2%
        44%
        1.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD08_i5-512_i7-140_S693_L004_R2_001
        22.1%
        44%
        1.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD09_i5-512_i7-141_S694_L004_R1_001
        26.4%
        45%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD09_i5-512_i7-141_S694_L004_R2_001
        24.2%
        45%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD10_i5-512_i7-142_S695_L004_R1_001
        21.4%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD10_i5-512_i7-142_S695_L004_R2_001
        19.8%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD11_i5-512_i7-143_S696_L004_R1_001
        24.1%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD11_i5-512_i7-143_S696_L004_R2_001
        22.1%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD12_i5-512_i7-144_S697_L004_R1_001
        23.3%
        44%
        1.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WD12_i5-512_i7-144_S697_L004_R2_001
        20.9%
        44%
        1.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE01_i5-512_i7-145_S698_L004_R1_001
        24.3%
        44%
        1.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE01_i5-512_i7-145_S698_L004_R2_001
        22.1%
        44%
        1.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE02_i5-512_i7-146_S699_L004_R1_001
        19.6%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE02_i5-512_i7-146_S699_L004_R2_001
        17.7%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE03_i5-512_i7-147_S700_L004_R1_001
        21.2%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE03_i5-512_i7-147_S700_L004_R2_001
        19.1%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE04_i5-512_i7-148_S701_L004_R1_001
        19.7%
        43%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE04_i5-512_i7-148_S701_L004_R2_001
        16.8%
        43%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE05_i5-512_i7-149_S702_L004_R1_001
        16.5%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE05_i5-512_i7-149_S702_L004_R2_001
        13.8%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE06_i5-512_i7-150_S703_L004_R1_001
        28.5%
        45%
        1.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE06_i5-512_i7-150_S703_L004_R2_001
        26.4%
        45%
        1.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE07_i5-512_i7-151_S704_L004_R1_001
        17.8%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE07_i5-512_i7-151_S704_L004_R2_001
        14.6%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE08_i5-512_i7-152_S705_L004_R1_001
        27.8%
        43%
        1.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE08_i5-512_i7-152_S705_L004_R2_001
        25.7%
        43%
        1.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE09_i5-512_i7-153_S706_L004_R1_001
        26.5%
        45%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE09_i5-512_i7-153_S706_L004_R2_001
        24.2%
        45%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE10_i5-512_i7-154_S707_L004_R1_001
        20.1%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE10_i5-512_i7-154_S707_L004_R2_001
        17.4%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE11_i5-512_i7-155_S708_L004_R1_001
        23.5%
        43%
        1.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE11_i5-512_i7-155_S708_L004_R2_001
        20.6%
        43%
        1.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE12_i5-512_i7-156_S709_L004_R1_001
        25.1%
        43%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WE12_i5-512_i7-156_S709_L004_R2_001
        22.8%
        43%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF01_i5-512_i7-157_S710_L004_R1_001
        23.8%
        43%
        1.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF01_i5-512_i7-157_S710_L004_R2_001
        21.4%
        43%
        1.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF02_i5-512_i7-158_S711_L004_R1_001
        18.3%
        43%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF02_i5-512_i7-158_S711_L004_R2_001
        15.5%
        43%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF03_i5-512_i7-159_S712_L004_R1_001
        25.3%
        44%
        1.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF03_i5-512_i7-159_S712_L004_R2_001
        23.0%
        44%
        1.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF04_i5-512_i7-160_S713_L004_R1_001
        24.1%
        44%
        1.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF04_i5-512_i7-160_S713_L004_R2_001
        22.0%
        44%
        1.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF05_i5-512_i7-161_S714_L004_R1_001
        20.2%
        43%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF05_i5-512_i7-161_S714_L004_R2_001
        17.3%
        43%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF06_i5-512_i7-162_S715_L004_R1_001
        20.5%
        43%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF06_i5-512_i7-162_S715_L004_R2_001
        17.7%
        43%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF07_i5-512_i7-163_S716_L004_R1_001
        22.0%
        43%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF07_i5-512_i7-163_S716_L004_R2_001
        19.3%
        44%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF08_i5-512_i7-164_S717_L004_R1_001
        24.4%
        44%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF08_i5-512_i7-164_S717_L004_R2_001
        21.6%
        44%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF09_i5-512_i7-165_S718_L004_R1_001
        21.6%
        43%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF09_i5-512_i7-165_S718_L004_R2_001
        19.0%
        44%
        0.8
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF10_i5-512_i7-166_S719_L004_R1_001
        26.9%
        44%
        1.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF10_i5-512_i7-166_S719_L004_R2_001
        24.3%
        44%
        1.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF11_i5-512_i7-167_S720_L004_R1_001
        18.8%
        43%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF11_i5-512_i7-167_S720_L004_R2_001
        17.1%
        43%
        1.0
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF12_i5-512_i7-168_S721_L004_R1_001
        14.9%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WF12_i5-512_i7-168_S721_L004_R2_001
        13.1%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG01_i5-512_i7-169_S722_L004_R1_001
        18.1%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG01_i5-512_i7-169_S722_L004_R2_001
        16.2%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG02_i5-512_i7-170_S723_L004_R1_001
        20.0%
        45%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG02_i5-512_i7-170_S723_L004_R2_001
        18.7%
        45%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG03_i5-512_i7-171_S724_L004_R1_001
        17.8%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG03_i5-512_i7-171_S724_L004_R2_001
        16.4%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG04_i5-512_i7-172_S725_L004_R1_001
        15.1%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG04_i5-512_i7-172_S725_L004_R2_001
        13.2%
        43%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG05_i5-512_i7-173_S726_L004_R1_001
        18.0%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG05_i5-512_i7-173_S726_L004_R2_001
        16.3%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG06_i5-512_i7-174_S727_L004_R1_001
        16.4%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG06_i5-512_i7-174_S727_L004_R2_001
        14.5%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG07_i5-512_i7-175_S728_L004_R1_001
        17.2%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG07_i5-512_i7-175_S728_L004_R2_001
        15.6%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG08_i5-512_i7-176_S729_L004_R1_001
        16.4%
        44%
        0.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG08_i5-512_i7-176_S729_L004_R2_001
        15.0%
        44%
        0.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG09_i5-512_i7-177_S730_L004_R1_001
        17.3%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG09_i5-512_i7-177_S730_L004_R2_001
        15.0%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG10_i5-512_i7-178_S731_L004_R1_001
        16.9%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG10_i5-512_i7-178_S731_L004_R2_001
        14.9%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG11_i5-512_i7-179_S732_L004_R1_001
        14.0%
        43%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG11_i5-512_i7-179_S732_L004_R2_001
        11.9%
        43%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG12_i5-512_i7-180_S733_L004_R1_001
        14.5%
        43%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WG12_i5-512_i7-180_S733_L004_R2_001
        12.7%
        43%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH01_i5-512_i7-181_S734_L004_R1_001
        20.5%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH01_i5-512_i7-181_S734_L004_R2_001
        18.8%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH02_i5-512_i7-182_S735_L004_R1_001
        18.1%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH02_i5-512_i7-182_S735_L004_R2_001
        16.6%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH03_i5-512_i7-183_S736_L004_R1_001
        16.9%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH03_i5-512_i7-183_S736_L004_R2_001
        15.1%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH04_i5-512_i7-184_S737_L004_R1_001
        18.3%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH04_i5-512_i7-184_S737_L004_R2_001
        16.3%
        45%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH05_i5-512_i7-185_S738_L004_R1_001
        13.9%
        43%
        0.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH05_i5-512_i7-185_S738_L004_R2_001
        12.0%
        43%
        0.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH06_i5-512_i7-186_S739_L004_R1_001
        17.1%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH06_i5-512_i7-186_S739_L004_R2_001
        15.6%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH07_i5-512_i7-187_S740_L004_R1_001
        17.2%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH07_i5-512_i7-187_S740_L004_R2_001
        15.5%
        44%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH08_i5-512_i7-188_S741_L004_R1_001
        17.8%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH08_i5-512_i7-188_S741_L004_R2_001
        15.8%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH09_i5-512_i7-189_S742_L004_R1_001
        20.7%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH09_i5-512_i7-189_S742_L004_R2_001
        19.3%
        45%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH10_i5-512_i7-190_S743_L004_R1_001
        22.2%
        45%
        0.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH10_i5-512_i7-190_S743_L004_R2_001
        20.6%
        45%
        0.2
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH11_i5-512_i7-191_S744_L004_R1_001
        17.5%
        45%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH11_i5-512_i7-191_S744_L004_R2_001
        15.8%
        45%
        0.3
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH12_i5-512_i7-192_S745_L004_R1_001
        14.3%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P02_WH12_i5-512_i7-192_S745_L004_R2_001
        12.4%
        43%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WA01_i5-511_i7-101_S754_L004_R1_001
        16.6%
        43%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WA01_i5-511_i7-101_S754_L004_R2_001
        14.8%
        43%
        0.9
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WB01_i5-511_i7-113_S755_L004_R1_001
        17.1%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WB01_i5-511_i7-113_S755_L004_R2_001
        15.6%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WC01_i5-511_i7-125_S756_L004_R1_001
        18.4%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WC01_i5-511_i7-125_S756_L004_R2_001
        16.8%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WD01_i5-511_i7-137_S757_L004_R1_001
        18.2%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WD01_i5-511_i7-137_S757_L004_R2_001
        16.5%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WE01_i5-511_i7-149_S758_L004_R1_001
        14.6%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WE01_i5-511_i7-149_S758_L004_R2_001
        12.9%
        44%
        0.4
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WF01_i5-511_i7-161_S759_L004_R1_001
        13.6%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WF01_i5-511_i7-161_S759_L004_R2_001
        11.7%
        44%
        0.5
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WG01_i5-511_i7-173_S760_L004_R1_001
        16.5%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WG01_i5-511_i7-173_S760_L004_R2_001
        14.6%
        44%
        0.7
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WH01_i5-511_i7-185_S761_L004_R1_001
        17.3%
        45%
        0.6
        RAPiD-Genomics_GW180323979_WSU_125601_P03_WH01_i5-511_i7-185_S761_L004_R2_001
        15.8%
        45%
        0.6

        FastQC

        FastQC is a quality control tool for high throughput sequence data, written by Simon Andrews at the Babraham Institute in Cambridge.

        Sequence Counts

        Sequence counts for each sample. Duplicate read counts are an estimate only.

        This plot show the total number of reads, broken down into unique and duplicate if possible (only more recent versions of FastQC give duplicate info).

        You can read more about duplicate calculation in the FastQC documentation. A small part has been copied here for convenience:

        Only sequences which first appear in the first 100,000 sequences in each file are analysed. This should be enough to get a good impression for the duplication levels in the whole file. Each sequence is tracked to the end of the file to give a representative count of the overall duplication level.

        The duplication detection requires an exact sequence match over the whole length of the sequence. Any reads over 75bp in length are truncated to 50bp for this analysis.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Sequence Quality Histograms

        The mean quality value across each base position in the read.

        To enable multiple samples to be plotted on the same graph, only the mean quality scores are plotted (unlike the box plots seen in FastQC reports).

        Taken from the FastQC help:

        The y-axis on the graph shows the quality scores. The higher the score, the better the base call. The background of the graph divides the y axis into very good quality calls (green), calls of reasonable quality (orange), and calls of poor quality (red). The quality of calls on most platforms will degrade as the run progresses, so it is common to see base calls falling into the orange area towards the end of a read.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Per Sequence Quality Scores

        The number of reads with average quality scores. Shows if a subset of reads has poor quality.

        From the FastQC help:

        The per sequence quality score report allows you to see if a subset of your sequences have universally low quality values. It is often the case that a subset of sequences will have universally poor quality, however these should represent only a small percentage of the total sequences.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Per Base Sequence Content

        The proportion of each base position for which each of the four normal DNA bases has been called.

        To enable multiple samples to be shown in a single plot, the base composition data is shown as a heatmap. The colours represent the balance between the four bases: an even distribution should give an even muddy brown colour. Hover over the plot to see the percentage of the four bases under the cursor.

        To see the data as a line plot, as in the original FastQC graph, click on a sample track.

        From the FastQC help:

        Per Base Sequence Content plots out the proportion of each base position in a file for which each of the four normal DNA bases has been called.

        In a random library you would expect that there would be little to no difference between the different bases of a sequence run, so the lines in this plot should run parallel with each other. The relative amount of each base should reflect the overall amount of these bases in your genome, but in any case they should not be hugely imbalanced from each other.

        It's worth noting that some types of library will always produce biased sequence composition, normally at the start of the read. Libraries produced by priming using random hexamers (including nearly all RNA-Seq libraries) and those which were fragmented using transposases inherit an intrinsic bias in the positions at which reads start. This bias does not concern an absolute sequence, but instead provides enrichement of a number of different K-mers at the 5' end of the reads. Whilst this is a true technical bias, it isn't something which can be corrected by trimming and in most cases doesn't seem to adversely affect the downstream analysis.

        Click a sample row to see a line plot for that dataset.
        Rollover for sample name
        Position: -
        %T: -
        %C: -
        %A: -
        %G: -

        Per Sequence GC Content

        The average GC content of reads. Normal random library typically have a roughly normal distribution of GC content.

        From the FastQC help:

        This module measures the GC content across the whole length of each sequence in a file and compares it to a modelled normal distribution of GC content.

        In a normal random library you would expect to see a roughly normal distribution of GC content where the central peak corresponds to the overall GC content of the underlying genome. Since we don't know the the GC content of the genome the modal GC content is calculated from the observed data and used to build a reference distribution.

        An unusually shaped distribution could indicate a contaminated library or some other kinds of biased subset. A normal distribution which is shifted indicates some systematic bias which is independent of base position. If there is a systematic bias which creates a shifted normal distribution then this won't be flagged as an error by the module since it doesn't know what your genome's GC content should be.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Per Base N Content

        The percentage of base calls at each position for which an N was called.

        From the FastQC help:

        If a sequencer is unable to make a base call with sufficient confidence then it will normally substitute an N rather than a conventional base call. This graph shows the percentage of base calls at each position for which an N was called.

        It's not unusual to see a very low proportion of Ns appearing in a sequence, especially nearer the end of a sequence. However, if this proportion rises above a few percent it suggests that the analysis pipeline was unable to interpret the data well enough to make valid base calls.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Sequence Length Distribution

        All samples have sequences of a single length (151bp).

        Sequence Duplication Levels

        The relative level of duplication found for every sequence.

        From the FastQC Help:

        In a diverse library most sequences will occur only once in the final set. A low level of duplication may indicate a very high level of coverage of the target sequence, but a high level of duplication is more likely to indicate some kind of enrichment bias (eg PCR over amplification). This graph shows the degree of duplication for every sequence in a library: the relative number of sequences with different degrees of duplication.

        Only sequences which first appear in the first 100,000 sequences in each file are analysed. This should be enough to get a good impression for the duplication levels in the whole file. Each sequence is tracked to the end of the file to give a representative count of the overall duplication level.

        The duplication detection requires an exact sequence match over the whole length of the sequence. Any reads over 75bp in length are truncated to 50bp for this analysis.

        In a properly diverse library most sequences should fall into the far left of the plot in both the red and blue lines. A general level of enrichment, indicating broad oversequencing in the library will tend to flatten the lines, lowering the low end and generally raising other categories. More specific enrichments of subsets, or the presence of low complexity contaminants will tend to produce spikes towards the right of the plot.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Overrepresented sequences

        The total amount of overrepresented sequences found in each library.

        FastQC calculates and lists overrepresented sequences in FastQ files. It would not be possible to show this for all samples in a MultiQC report, so instead this plot shows the number of sequences categorized as over represented.

        Sometimes, a single sequence may account for a large number of reads in a dataset. To show this, the bars are split into two: the first shows the overrepresented reads that come from the single most common sequence. The second shows the total count from all remaining overrepresented sequences.

        From the FastQC Help:

        A normal high-throughput library will contain a diverse set of sequences, with no individual sequence making up a tiny fraction of the whole. Finding that a single sequence is very overrepresented in the set either means that it is highly biologically significant, or indicates that the library is contaminated, or not as diverse as you expected.

        FastQC lists all of the sequences which make up more than 0.1% of the total. To conserve memory only sequences which appear in the first 100,000 sequences are tracked to the end of the file. It is therefore possible that a sequence which is overrepresented but doesn't appear at the start of the file for some reason could be missed by this module.

        400 samples had less than 1% of reads made up of overrepresented sequences

        Adapter Content

        The cumulative percentage count of the proportion of your library which has seen each of the adapter sequences at each position.

        Note that only samples with ≥ 0.1% adapter contamination are shown.

        There may be several lines per sample, as one is shown for each adapter detected in the file.

        From the FastQC Help:

        The plot shows a cumulative percentage count of the proportion of your library which has seen each of the adapter sequences at each position. Once a sequence has been seen in a read it is counted as being present right through to the end of the read so the percentages you see will only increase as the read length goes on.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Status Checks

        Status for each FastQC section showing whether results seem entirely normal (green), slightly abnormal (orange) or very unusual (red).

        FastQC assigns a status for each section of the report. These give a quick evaluation of whether the results of the analysis seem entirely normal (green), slightly abnormal (orange) or very unusual (red).

        It is important to stress that although the analysis results appear to give a pass/fail result, these evaluations must be taken in the context of what you expect from your library. A 'normal' sample as far as FastQC is concerned is random and diverse. Some experiments may be expected to produce libraries which are biased in particular ways. You should treat the summary evaluations therefore as pointers to where you should concentrate your attention and understand why your library may not look random and diverse.

        Specific guidance on how to interpret the output of each module can be found in the relevant report section, or in the FastQC help.

        In this heatmap, we summarise all of these into a single heatmap for a quick overview. Note that not all FastQC sections have plots in MultiQC reports, but all status checks are shown in this heatmap.

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